OK, first of all, I LOVE EJUNKIE! Great to hear that you guys are working on making a great product even better!
Here are my two biggest wishlist items:
Make it possible to EDIT shipping rules, rather than having to delete and recreate them. Our postal service just changed their rates, and I have still not updated my rules because I am so dreading the process. It would be great if shipping ZONES could be implemented, i.e., a simple way to group countries into zones and then just create rates for the zones. But if that isn't feasible, than at least the ability to EDIT shipping rules would be awesome.
There is currently no way to get a simple overview of stock levels for all products. It would sure be useful to be able to do a quick stock check! Unless I'm mistaken, you have to go in and edit each product one by one to check the stock levels. If you only have a couple of products, it's no big deal, but if you have a lot of products it's quite annoying to have to do this.